Bakker, M., 2003. A Dupuit formulation for modeling seawater intrusion in regional aquifer systems. Water Resources. Research 39(5), 1131, doi:10.1029/2002WR001710.

Bakker, M., Oude Essink, G.H.P., and Langevin, C.D., 2004. The rotating movement of three immiscible fluids-a benchmark problem. Journal of Hydrology 287, 270-278.

Bales, J.D., and Robbins, J.C., 1995. Simulation of hydrodynamics and solute transport in the Pamlico River Estuary, NC. U.S. Geological Survey Open-File Report 94-454, 85 pp.

Brown, G.L., McAdory, R.T., Nail, G.H., Sarruff, M.S., Berger, R.C., and Granat, M.A., 2003. Development of a two-dimensional numerical model of hydrodynamics and salinity for Biscayne Bay, FL. U.S. Army Corps of Engineers Technical Report CHL-03-10.

Desmond, G., 2003. Measuring and mapping the topography of the Florida Everglades for ecosystem restoration, in U.S. Geological Survey Greater Everglades Science Program: 2002 Biennial Report April 13-18, 2003, U.S. Geological Survey Open-File Report 03-54, 31-32.

Fairbanks, J., Panday, S., and Huyakorn, P.S., 2001. Comparisons of linked and fully coupled approaches to simulating conjunctive surface/subsurface flow and their interactions, in MODFLOW 2001 and Other Modeling Odysseys, Conference Proceedings, Golden, Colorado, edited by Seo, B., Poeter, E., and C. Zheng, pp. 356-361.

Fischer, H.B., List, J.E., Koh, R.C.Y., et al., 1979. Mixing in inland and coastal waters: New York, N.Y., Academic Press, pp. 126-127, 263.

Fish, J.E., and Stewart, M.T., 1991. Hydrogeology of the surficial aquifer system, Dade County, Florida. U.S. Geological Survey Water Resources Investigations Report 90-4108, 50 p.

Fitterman, D.V., and Deszcz-Pan, M., 1998. Helicopter EM mapping of saltwater intrusion in Everglades National Park. Florida Exploration Geophysics 29, 240-243.

Fitterman, D.V., Deszcz-Pan, M., and Stoddard, C.E., 1999. Results of time-domain electromagnetic soundings in Everglades National Park, Florida. U.S. Geological. Survey Open-File Report 99-426.

German, E.R., 1999. Regional evaluation of evapotranspiration in the Everglades, in Proceedings of the 3rd International Symposium on Ecohydraulics, Salt Lake City, Utah, July 13-16.

German, E.R., 2000a. Regional evaluation of evapotranspiration in the Everglades. U.S. Geological Survey Water-Resources Investigations Report 00-4217, 48 pp.

German, E.R., 2000b. Regional evaluation of evapotranspiration in the Everglades, in U.S. Geological Survey Program on the South Florida Ecosystem: 2000 Proceedings of the Greater Everglades Ecosystem Restoration (GEER) Conference, December 11-15, 2000, edited by Eggleston et al., U.S. Geological Survey Open-File Report 00-449, pp. 21-23.

Goodwin, C.R., 1987. Tidal-flow, circulation, and flushing changes caused by dredge and fill in Tampa Bay, Florida. U.S. Geological Survey Water-Supply Paper 2282, 88 pp.

Goodwin, C.R., 1991. Tidal-flow, circulation, and flushing changes caused by dredge and fill in Hillsborough Bay, Florida. U.S. Geological Survey Water-Supply Paper 2376, 49 pp.

Goodwin, C.R., 1996. Simulation of tidal-flow, circulation, and flushing of the Charlotte Harbor Estuarine System, Florida. U.S. Geological Survey Water-Resources Investigations Report 93-4153, 92 p.

Graham, D.N., and Refsgaard, A., 2001. MIKE SHE: A distributed, physically based modeling system for surface water/groundwater interactions, in MODFLOW 2001 and Other Modeling Odysseys, Conference Proceedings, Golden, Colorado, edited by Seo, B., Poeter, E., and C. Zheng, 321-327.

Guo, W., and Bennett, G.D., 1998. Simulation of saline/fresh water flows using MODFLOW, in MODFLOW '98 Conference, Golden, Colorado, 1998, Proceedings (1), edited by E. Poeter, et al., 267-274.

Guo, W., and Langevin, C.D., 2002. User's guide to SEAWAT: A computer program for simulation of three-dimensional variable-density ground-water flow: U.S. Geol. Survey Open-File Report 01-434, 79 pp.

Hansen, M., and DeWitt, N.T., 2000. 1890 and 1990 bathymetry of Florida Bay. U.S. Geological Survey Open-File Report 00-347. http://sofia.usgs.gov/publications/ofr/00-347/.

Harvey, J.W., Choi, J., and Mooney, R.H., 2000a. Hydrologic interactions between surface water and ground water in Taylor Slough, Everglades National Park, in U.S. Geological Survey Program on the South Florida Ecosystem: 2000 Proceedings of the Greater Everglades Ecosystem Restoration (GEER) Conference, December 11-15, 2000, edited by Eggleston et al., U.S. Geological Survey Open-File Report 00-449, pp. 24-26.

Harvey, J.W., Jackson, J.M., Mooney, R.H., and Choi, J., 2000b. Interactions between ground water and surface water in Taylor Slough and Vicinity, Everglades National Park, south Florida: Study Methods and Appendixes. U.S. Geological Survey Open-File Report 00-483, 67 pp.

Hittle, C.D., 2000. Quantity, timing, and distribution of freshwater flows into northeastern Florida Bay, in U.S. Geological Survey Program on the South Florida Ecosystem: 2000 Proceedings of the Greater Everglades Ecosystem Restoration (GEER) Conference, December 11-15, 2000, edited by Eggleston et al., U.S. Geological Survey Open-File Report 00-449, pp. 27-28, 2000.

Hittle, C.D., Patino, E., and Zucker, M.A., 2001. Freshwater flow from estuarine creeks into northeastern Florida Bay. U.S. Geological Survey Water-Resources Investigations Report 01-4164, 32 p.

Holmes, C.W., Robbins, J., Halley, R., et al., 2000. Sediment dynamics of Florida Bay mud banks on a decadal time scale, in U.S. Geological Survey Program on the South Florida Ecosystem: 2000 Proceedings of the Greater Everglades Ecosystem Restoration (GEER) Conference, December 11-15, 2000, edited by Eggleston et al. U.S. Geological Survey Open-File Report 00-449, pp. 108.

HydroGeoLogic Inc., 2003. MODHMS - A Comprehensive MODFLOW-based Hydrologic Modeling System, Version 2.1, HydroGeoLogic Inc., Herndon, Virginia.

Jarosewich, M. and Wagner, J., 1985. Geologic structure of the surficial aquifer system underlying Everglades National Park and the Big Cypress National Preserve, 43 pp, Everglades National Park, South Florida Research Center, Homestead, Florida.

Jenter, H.L., and Duff, M.P., 1999. Locally-forced wind effects on shallow waters with emergent vegetation, in Proceedings of the 3rd International Symposium on Ecohydraulics, Salt Lake City, Utah, July 13-16, 1999.

Juster, T.C., 1995. Circulation of saline and hypersaline groundwater in carbonate mud: mechanisms, rates, and an example from Florida Bay. Ph.D. Dissertation, University of South Florida, Tampa, Florida. 215 p.

Kohout, F.A., 1964. The flow of fresh water and salt water in the Biscayne aquifer of the Miami area, Florida, in Sea Water in Coastal Aquifers. U.S. Geological Survey Water-Supply Paper 1613-C, pp. 12-32.

Knight, E.L., Kotun, K., and James, F.E., 2000. An evaluation of the hydrologic conditions resulting from Hurricane Irene in Everglades National Park, DRAFT. 94 pp. South Florida Natural Resources Center, Everglades National Park, Homestead, Florida.

Langevin, C.D., Simulation of ground-water discharge to Biscayne Bay, Southeastern Florida. U.S. Geological Survey Water-Resources Investigations Report 00-4251, 127 pp.

Langevin, C.D., 2003. Simulation of submarine ground water discharge to a marine estuary: Biscayne Bay, Florida. Ground Water 41(6), 758-771.

Langevin, C.D., Shoemaker, W.B., and Guo, W., 2003. MODFLOW-2000, the U.S. Geological Survey modular ground-water model-documentation of the SEAWAT-2000 version with the variable-density flow process (VDF) and the integrated MT3DMS transport process (IMT), U.S. Geological Survey Open-File Report 03-426, 43 p.

Langevin, C.D., Swain, E.D., and Wolfert, M.A., 2004. Simulation of integrated surface-water/ground-water flow and salinity for a coastal wetland and adjacent estuary: U.S. Geological Survey Open-File Report 2004-1097.

Large, W.G., and Pond, S., 1981. Open ocean momentum flux measurements in moderate to strong winds, Journal of Physical Oceanography 11, 324-336.

Lee, J.K., Carter, V., and Rybicki, N.B., 1999. Determining flow-resistance coefficients in the Florida Everglades, in Proceedings of the 3rd International Symposium on Ecohydraulics, Salt Lake City, Utah, July 13-16, 1999.

Lee, J.K., Jenter, H.L.. Lai, V.C., et al., 2000. A pipe manometer for the determination of very small water-surface slopes in the Florida Everglades, in U.S. Geological Survey Program on the South Florida Ecosystem: 2000 Proceedings of the Greater Everglades Ecosystem Restoration (GEER) Conference, December 11-15, 2000, edited by Eggleston et al., U.S. Geological Survey Open-File Report 00-449, pp. 31-32.

Leendertse, J.J., 1972. A Water-quality simulation model for well-mixed estuaries and coastal seas: Volume IV, Jamaica Bay tidal flows. New York, 48 p., The New York City Rand Institute, R-1009-NYC.

Leendertse, J.J., 1987. Aspects of SIMSYS2D, a system for two-dimensional flow computation. Santa Monica, Calif., Rand Corporation Report R-3572-USGS, 80 p.

Leendertse, J.J., Langerak, A., and de Ras, M.A.M., 1981. Two-dimensional tidal models for the Delta Works, in Transport models for inland and coastal waters, proceedings of a symposium on predictive ability, edited by H.B. Fischer, Academic Press, New York.

Leendertse, J.J., and Gritton, E.C., 1971. A water-quality simulation model for well-mixed estuaries and coastal seas: Volume II, Computation procedures: 48 pp. New York, The New York City Rand Institute, R-708-NYC.

Lusczynski, N.J., 1961. Head and flow of ground water of variable density. Journal of Geophysical Research 66, 4247-4256.

McDonald, M.G., and Harbaugh, A.W., 1988. A modular three-dimensional finite-difference ground-water flow model. U.S. Geological Survey Techniques of Water-Resources Investigations, Book 6, chapter A1, 586 pp.

McDonald, M.G., Harbaugh, A.W., Orr, B.R., and Ackerman, D.J., 1992. A method of converting no-flow cells to variable-head cells for the U.S. Geological Survey modular finite-difference ground-water flow model. U.S. Geological Survey Open-File Report 91-536, 99 p.

Merritt, M.L., 1996a. Simulation of the water table altitude in the Biscayne aquifer, southern Dade County, Florida, water years 1945-89. U.S. Geological Survey Water-Supply Paper 2458, 148 p.

Merritt, M.L., 1996b. Numerical simulation of a plume of brackish water in the Biscayne aquifer originating from a flowing artesian well, Dade County, Florida. U.S. Geological Survey Water-Supply Paper 2464, 74 pp.

Nuttle, W.K., Forqurean, J.W., Cosby, B.J., Zieman, J.C., and Robblee, M.B., 2000. Influence of net freshwater supply on salinity in Florida Bay. Water Resources Research 36 (7), 1805-1822.

Panday, S. and Huyakorn, P.S., 2004. A fully coupled physically-based spatially-distributed model for evaluating surface/subsurface flow. Advances in Water Resources, in press.

Prager, E., and Halley, R., 1997. Florida Bay bottom types. U.S. Geological Survey Open-File Report 97-526, 1 p.

Price, R.M., 2001. Geochemical determinations of groundwater flow in Everglades National Park, Ph.D. Dissertation, University of Miami, Coral Gables, Florida. 235 p.

Reid, R.O., and Whitaker, R.E., 1976. Wind-driven flow of water influenced by a canopy. Journal of the Waterways, Harbors, and Coastal Engineering Division, 102 (WW1), 61-77.

Robbins, J.C., and Bales, J.D., 1995. Simulation of hydrodynamics and solute transport in the Neuse River Estuary, North Carolina. U.S. Geological Survey Open-File Report 94-511, 85 p.

Sonenshein, R.S., 1997. Delineation and extent of saltwater intrusion in the Biscayne aquifer, Eastern Dade County, Florida, 1995. U.S. Geological Survey Water-Resources Investigations Report 96-4285, 1 sheet.

Stewart, M.A., Bhatt, T.N., Fennema, R.J., and Fitterman, D.V., 2002. The road to Flamingo: An evaluation of flow pattern alterations and salinity intrusion in the lower glades, Everglades National Park. U.S. Geological Survey Open-File Report 02-59, 36 pp.

Swain, E.D., Howie, B., and Dixon, J., 1996. Description and field analysis of a coupled ground-water/surface-water flow model (MODFLOW/BRANCH) with modifications for structures and wetlands in southern Dade County, Florida. U.S. Geological Survey Water-Resources Investigations Report 96-4118, 67 p.

Swain, E.D., Wolfert, M., Bales, J.D., and Goodwin, C.R., 2004. Two-dimensional hydrodynamic simulation of surface-water flow and transport to Florida Bay through the Southern Inland and Coastal Systems (SICS). U.S. Geological Survey Water-Resources Investigations Report 03-4287, 56 p.

Tillis, G.M., 2001. Measuring Taylor Slough boundary and internal flows, Everglades National Park, Florida. U.S. Geological Survey Open-File Report 01-225, 16 p.

VanderKwaak, J.E., 1999. Numerical simulation of flow and chemical transport in integrated surface-subsurface hydrologic systems, Ph.D. Dissertation, Dept. of Earth Sciences, University of Waterloo, Ontario, Canada, 217 p.

VanderKwaak, J.E., and Loague, K., 2001. Hydrologic-response simulations for the R-5 catchment with a comprehensive physics-based model. Water Resources Research 37(4), 999-1013.

Wang, J.D., Luo, J., and Ault, J.S., 2003. Flows, salinity, and some implications for larval transport in South Biscayne Bay, Florida. Bulletin of Marine Science 73(3), 695-723.

Yeh, G. T. and Huang, G.B., 2003. A Numerical Model to Simulate Water Flow in Watershed Systems of 1-D Stream-River Network, 2-D Overland Regime, and 3-D Subsurface Media (WASH123D: Version 1.5), Technical Report. Dept. of Civil and Environmental Engineering, University of Central Florida, Orlando, Florida.

Zheng, C., and Wang, P.P., 1999. MT3DMS-A modular three-dimensional multispecies transport model for simulation of advection, dispersion and chemical reactions of contaminants in ground-water systems; documentation and user's guide, U.S. Army Corps of Engineers Contract Report SERDP-99-1.