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Across Trophic Level System Simulation (ATLSS) Program

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Frequently-anticipated questions:


What does this data set describe?

Title: Across Trophic Level System Simulation (ATLSS) Program
Abstract:
The ATLSS (Across Trophic Level System Simulation) program addresses CERP’s (Comprehensive Everglades Restoration Plan) need for quantitative projections of effects of scenarios on biota of the Greater Everglades and can provide guidance to monitoring in an adaptive assessment framework. It does this through creating a suite of models for selected Everglades biota, which can translate the hydrologic scenarios into effects on habitat and demographic variables of populations.

ATLSS is constructed as a multimodel, meaning that it includes a collection of linked models for various physical and biotic systems components of the Greater Everglades. The ATLSS models are all linked through a common framework of vegetative, topographic, and land use maps that allow for the necessary interaction between spatially explicit information on physical processes and the dynamics of organism response across the landscape.

Currently, two important new developments are taking place. First the ATLSS models will soon migrate to a Web-based availability, so that they can be run remotely for various hydrologic scenarios and a set of different assumptions. Second, a vegetation succession model is being completed, which will allow projection of changes in vegetation types across the Everglades landscape as a function of changing hydrology, fire frequency, and nutrient loading.

Supplemental_Information:
There are several submodels within the ATLSS Project, including: Alligators, Cape Sable Seaside Sparrows, Crayfish, Deer, Fish, Florida Panthers, Hydrology, Snail Kite, Landscape/Vegetation, and Wading Birds.

Models currently available are:

ATLSS SESI models: Cape sable seaside sparrow breeding potential index (Version 1.1) Snail kite breeding potential index (Version 1.1) Long-legged wading bird foraging condition index (Version 1.1) Short-legged wading bird foraging condition index (Version 1.1) Empirically-based fish biomass index (Version 1.1) White-tailed deer breeding potential index (Version 1.1) American alligator breeding potential index (Version 1.1) Everglades and slough crayfish (Version 1.1) Apple snail SESI model (Version 1.1)

Spatially Explicit Demographic Models: Cape sable seaside sparrow demographic model (SIMSPAR - Version 1.3) Snail kite demographic model (EVERKITE - Version 3.1) Alligator demographic model (Version 1.1)

Spatially Explicit Functional Group Models: Freshwater fish dynamics (ALFISH - Version 3.1.17)

GIS Animal Tracking Tool: Florida panther tracking tool (PANTRACK - Version 1.1)

Landscape Models: High Resolution Topography (HRT - Version 1.4.8)

Vegetation productivity (HTDAM - Version 1.1) High Resolution

Hydrology (HRH - Version 1.4.8)

  1. How should this data set be cited?

    Don DeAngelis Louis J. Gross, Steve Hartley, James Johnston, Frank , Unknown, Across Trophic Level System Simulation (ATLSS) Program.

    Online Links:

  2. What geographic area does the data set cover?

    West_Bounding_Coordinate: -81.30333
    East_Bounding_Coordinate: -80.262125
    North_Bounding_Coordinate: 25.847113
    South_Bounding_Coordinate: 24.696151
    Description_of_Geographic_Extent: wetland systems of south Florida

  3. What does it look like?

  4. Does the data set describe conditions during a particular time period?

    Beginning_Date: 1996
    Ending_Date: Unknown
    Currentness_Reference: publication date

  5. What is the general form of this data set?

    Geospatial_Data_Presentation_Form: models, reports

  6. How does the data set represent geographic features?

    1. How are geographic features stored in the data set?

      Indirect_Spatial_Reference: ATLSS

    2. What coordinate system is used to represent geographic features?

  7. How does the data set describe geographic features?

  8. What biological taxa does this data set concern?

    Taxonomy:
    Keywords/Taxon:
    Taxonomic_Keyword_Thesaurus: none
    Taxonomic_Keywords: animals
    Taxonomic_Keywords: mammals
    Taxonomic_Keywords: reptiles
    Taxonomic_Keywords: vertebrates
    Taxonomic_Keywords: single species
    Taxonomic_System:
    Classification_System/Authority:
    Classification_System_Citation:
    Citation_Information:
    Originator:
    U.S. Department of Agriculture - Agricultural Research Service (ARS)

    U.S. Department of Agriculture - Natural Resources Conservation Service (NRCS) Department of the Interior - U.S. Geological Survey Department of Commerce - National Oceanic and Atmospheric Administration (NOAA) Environmental Protection Agency (EPA) Smithsonian Institution - National Museum of Natural History (NMNH)

    Publication_Date: 2000
    Title: Integrated Taxonomic Information System (ITIS)
    Geospatial_Data_Presentation_Form: Database
    Other_Citation_Details:
    Retrieved from the Integrated Taxonomic Information System on-line database, <http://www.itis.gov>.
    Online_Linkage: <http://www.itis.gov>
    Taxonomic_Procedures: various depending on the animals studied
    Taxonomic_Completeness: various depending on the submodel requirements
    Taxonomic_Classification:
    Taxon_Rank_Name: Kingdom
    Taxon_Rank_Value: Animalia
    Applicable_Common_Name: animals
    Taxonomic_Classification:
    Taxon_Rank_Name: Phylum
    Taxon_Rank_Value: Chordata
    Applicable_Common_Name: chordates
    Taxonomic_Classification:
    Taxon_Rank_Name: Subphylum
    Taxon_Rank_Value: Vertebrata
    Applicable_Common_Name: vertebrates


Who produced the data set?

  1. Who are the originators of the data set? (may include formal authors, digital compilers, and editors)

  2. Who also contributed to the data set?

    Project personnel include Brian Beckage, Rob Bennetts, Cristina Bondavalli, Laura Brandt, Kevin Chartier, Matthew Chopp, Jon Cline, Jane Comiskey, Phil Darby, Quan Dong, Thomas W. Doyle, Scott Duke-Sylvester, Jennifer DuPree, Paul A. Fishwick, Holly Gaff, Michael S. Gaines, Dale E. Gawlik, Chris Gregory, Johanna J. Heymans, Ray Hilborn, Michael Ignotovich, Brian Jeffrey, Wiley M. Kitchens, Ken W. Krauss, Jason Liddle, M. Philip Nott, Mark Palmer, Michael Peek, H. Franklin Percival, Amanda Rice, Victor H. Rivera-Monroy, Rene Salinas, Fred H. Sklar, William Sleavin, Daniel Slone, George Stewart, Robert R. Twilley, Robert E. Ulanowicz, and Paul R. Wetzel.

  3. To whom should users address questions about the data?

    Donald L. DeAngelis
    U.S. Geological Survey
    Dept. of Biology, Univ of Miami

    P.O. Box 249118
    Coral Gables, FL 33124-0421
    United States

    (305) 284-31690 (voice)
    (305) 284-3039 (FAX)
    don_deangelis@usgs.gov


Why was the data set created?

An essential component of restoration planning in South Florida has been the development and use of computer simulation models for the major physical processes driving the system, notably models of hydrology incorporating effects of alternative human control systems and non controlled inputs such as rainfall. The USGS’s ATLSS (Across Trophic Level System Simulation) Program utilizes the outputs of such physical system models as inputs to a variety of ecological models that compare the relative impacts of alternative hydrologic scenarios on the biotic components of South Florida. The immediate objective of ATLSS is to provide a rational, scientific basis for ranking the water management scenarios as part of to the planning process for Everglades restoration. The longer term goals of ATLSS are to help achieve a better understanding of components of the Everglades ecosystem, to provide an integrative tool for empirical studies, and to provide a framework monitoring and adaptive management schemes. The ATLSS Program coordinates and integrates the work of modelers and empirical ecologists at many universities and research centers.

The ongoing goals in the ATLSS Program have been to produce models capable of projecting and comparing the effects of alternative hydrologic scenarios on various trophic components of the Everglades. The methodology involves: 1) a landscape structure; 2) a high resolution topography to estimate high resolution water depth across the landscape; 3) models to calculate spatially explicit species indices (SESI) for breeding and foraging success measures across the landscape; 4) spatially explicit individual-based (SEIB) computer simulation models of selected species populations; and 5) ability to plug into variety of visualization and evaluation tools to aid model development, validation, and comparison to field data. Included in this are numerous sub-projects for different species, vegetation succession, analysis of alternative approaches to developing high resolution, models which deal with estuarine systems, methods to allow users from a variety of agencies to access and run the models, and methods to enhance the computational efficiency of the simulations. The continuing general objective is to provide a flexible, efficient collection of methods, utilizing the best current science, to evaluate the relative impacts of alternative hydrologic plans on the biotic systems of South Florida. This is done in a spatially-explicit manner which allows different stakeholders to evaluate the impacts based upon their own criteria for the locations and biotic systems under consideration.

There are four projects under the ATLSS program:

1. ATLSS Model Use in CERP Evaluations, Model Testing and Extension to Web-Based Interface

2. Development of an Internet Based GIS to Visualize ATLSS Datasets for Resource Managers

3. Spatial Decision Support for Biodiversity and Indicator Species Responses to CERP Project Activities

4. Integrating Wading Bird Empirical Data into a Model of Wading Bird Foraging Success as a Function of Hydrologic Conditions


How was the data set created?

  1. What methods were used to collect the data?

    Method 0 of 1
    Type: Field

    See <http://www.atlss.org> for information regarding the individual species and models.

  2. From what previous works were the data drawn?

  3. How were the data generated, processed, and modified?

    Date: Not complete (process 1 of 2)
    The ongoing goals in the ATLSS Program have been to produce models capable of projecting and comparing the effects of alternative scenarios on various trophic components of the Everglades. ATLSS models delivered in 2003 include:

    Vegetation Succession Model America Crocodile Model Crayfish Structured Population Model

    In addition, the ATLSS Program is supporting the development of a Decision Support System. This is to go beyond ad-hoc policy formulation to an analytical and computer-supported platform for effective management and policy-making. Part of this effort involves developing a GIS interface to the ATLSS models and providing network access to ATLSS models.

    Date: Not complete (process 2 of 2)
    Work planned for FY 2004 includes four projects needed to continue applications of the ATLSS program to CERP (Comprehensive Everglades Restoration Plan). These projects are: 1. ATLSS Model Use in CERP Evaluations, Model Testing, and Extension to Web Based Interface, 2. Development of an Internet Based GIS to Visualize ATLSS Datasets, 3. Spatial Decision Support for Biodiversity and Indicator Species Responses to CERP Project Activities, and 4. Integrating Wading Bird Empirical Data into a Model of Wading Bird Foraging Success as a Function of Hydrologic Conditions. The individual project metadata contain more detailed information about each project.

    Person who carried out this activity:

    Donald L. DeAngelis
    U.S. Geological Survey
    Dept. of Biology, Univ of Miami

    P.O. Box 249118
    Coral Gables, FL 33124-0421
    United States

    (305) 284-31690 (voice)
    (305) 284-3039 (FAX)
    don_deangelis@usgs.gov

  4. What similar or related data should the user be aware of?

    DeAngelis, D. L. Gross. L.J., 2002, The use of models for multi-scaled ecological monitoring: Island Press, Covela, CA.

    Other_Citation_Details:
    in Monitoring Ecosystems: Interdisciplinary Approaches for Evaluating Ecoregional Initiatives, eds. D. Busch and J. C. Trexler
    DeAngelis, D. L. Gross, Louis J., 1998, Landscape modeling for Everglades ecosystem restoration: Ecosystems v. 1, Springer-Verlag, New York, NY.

    DeAngelis, D. L. Gross, L. J., Wolff, W. F.,, 2000, Individual-based models on the landscape: applications to the Everglades: Lewis Publishers, Boca Raton, FL.

    Other_Citation_Details:
    in Landscape Ecology: A Top-Down Approach

    J. Sanderson and L. D. Harris, eds.


How reliable are the data; what problems remain in the data set?

  1. How well have the observations been checked?

  2. How accurate are the geographic locations?

  3. How accurate are the heights or depths?

  4. Where are the gaps in the data? What is missing?

    unavailable

  5. How consistent are the relationships among the observations, including topology?

    unavailable


How can someone get a copy of the data set?

Are there legal restrictions on access or use of the data?

Access_Constraints: none
Use_Constraints:
None. Acknowledgement of the U.S. Geological Survey would be appreciated for products derived from these data.

  1. Who distributes the data set? (Distributor 1 of 1)

    Donald L. DeAngelis
    U.S. Geological Survey
    Dept. of Biology, Univ of Miami

    P.O. Box 249118
    Coral Gables, FL 33124-0421
    United States

    (305) 284-31690 (voice)
    (305) 284-3039 (FAX)
    don_deangelis@usgs.gov

  2. What's the catalog number I need to order this data set?

    ATLSS models and data

  3. What legal disclaimers am I supposed to read?

    The models are subject to change. No warrantees are implied or explicit for the models.

  4. How can I download or order the data?


Who wrote the metadata?

Dates:
Last modified: 17-Jan-2007
Metadata author:
Heather Henkel
U.S. Geological Survey
600 Fourth Street South
St. Petersburg, FL 33701
USA

727 803-8747 ext 3028 (voice)
727 803-2030 (FAX)
sofia-metadata@usgs.gov

Metadata standard:
Content Standard for Digital Geospatial Metadata Part 1: Biological Data Profile (FGDC-STD-001.1-1999)


This page is <http://sofia.usgs.gov/metadata/sflwww/atlss_prog.faq.html>

U.S. Department of the Interior, U.S. Geological Survey, Center for Coastal Geology
Comments and suggestions? Contact: Heather Henkel - Webmaster
Generated by mp version 2.8.18 on Wed Jan 17 10:50:58 2007